BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B06LP1|AL430345
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig593 1456 0.0
3x_Contig1648 159 1e-38
>3x_Contig593
Length = 1682
Score = 1456 bits (734), Expect = 0.0
Identities = 748/752 (99%), Gaps = 1/752 (0%)
Strand = Plus / Minus
Query: 1 gatcacaaggatggataccctcagacagtacgtttccgtatggagcgatcttacaagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gatcacaaggatggataccctcagacagtacgtttccgtatggagcgatcttacaagaac 702
Query: 61 caacagttgatcctattactttttttttattttttgtccctccgggatggcaagagggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 caacagttgatcctattactttttttttattttttgtccctccgggatggcaagagggac 642
Query: 121 aaagaagaatcttcgttcttctttcttgttctcaacttcccagcttccgtgtgattaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaagaagaatcttcgttcttctttcttgttctcaacttcccagcttccgtgtgattaccc 582
Query: 181 tccgggacaacagaaaaactggcattcggtatcccgggaatctgctgagaaggaaagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tccgggacaacagaaaaactggcattcggtatcccgggaatctgctgagaaggaaagaaa 522
Query: 241 acgaaaaaaaaattgtacatttgtgtcacattatgaattacaggaagtcagaaaacaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 acgaaaaaaaaattgtacatttgtgtcacattatgaattacaggaagtcagaaaacaggc 462
Query: 301 agcacatgtctcgcacatgcatgtccatcagacgagacattatgagacatgcacgcgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agcacatgtctcgcacatgcatgtccatcagacgagacattatgagacatgcacgcgtgt 402
Query: 361 gagagacatagcaaaagtctctccagtacacacagaaagacacgttcacaatccaggcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagagacatagcaaaagtctctccagtacacacagaaagacacgttcacaatccaggcac 342
Query: 421 cccacagagaaaaaaaaaagaagaagcccggaagctggcacgccatcatcaaccaccgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cccacagagaaaaaaaaaagaagaagcccggaagctggcacgccatcatcaaccaccgct 282
Query: 481 cggtttacacgcatcccaactgtcttttttttctggaatcctataataactggcatctgg 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 cggtttacacgcatcccaactgtctttcttttctggaatcctataataactggcatctgg 222
Query: 541 aaatcacgttgtatgttgcaccatagtgactggctgtctgactagcaaacattgattccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaatcacgttgtatgttgcaccatagtgactggctgtctgactagcaaacattgattccc 162
Query: 601 tgattcccatttggctcaattttgatgagaa-acagttgattgattcttgtcaatttttt 659
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 161 tgattcccatttggctcaattttgatgagaacacagttgattgattcttgtcaattttct 102
Query: 660 tttctttggaccaccaccaaccaattgacattgaagtactttcccatgatttgaggttat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tttctttggaccaccaccaaccaattgacattgaagtactttcccatgatttgaggttat 42
Query: 720 ataaaaggacgtwcaaatcactttcaaggtta 751
|||||||||||| |||||||||||||||||||
Sbjct: 41 ataaaaggacgttcaaatcactttcaaggtta 10
>3x_Contig1648
Length = 16375
Score = 159 bits (80), Expect = 1e-38
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 771 tttaagttcaattgttaacaaatttaatttaattcgaaacaaaccaaaccaattcatttg 830
|||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| |||
Sbjct: 5 tttaagttcaattgttaacaaaattaaattaattcgaaacaaaccaaaccagttcgtttt 64
Query: 831 aattaacaaaccaacccacaaaacaaaaaaacatgccaatctctaaagtttacgccagat 890
| |||||||||||||||||||||| ||||||| | ||| | | |||||| ||| ||||||
Sbjct: 65 agttaacaaaccaacccacaaaacgaaaaaacgttccagtgtgtaaagtgtacaccagat 124
Query: 891 ccgtctacgattctcgtggtaacccaactgttgaag 926
|||| ||| || |||||||||||||| ||||||||
Sbjct: 125 ccgtgtacagttgtcgtggtaacccaagtgttgaag 160
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,223
Number of Sequences: 1807
Number of extensions: 12223
Number of successful extensions: 218
Number of sequences better than 1.0e-20: 2
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)